- Benjamin Blackman
- Evolutionary Process
- Assistant Professor
- 361 Koshland Hall
- Berkeley, CA, 94720-3102
- Phone 510.664.7807
- Lab Phone 510.664.7548
Ph.D. Evolutionary Biology and Ecology, Indiana University, Bloomington 2009
B.S. Biological Sciences, Stanford University, 2001
The Blackman Lab studies how plants adapt to local environments and how crops were domesticated, with an emphasis on studying how these evolutionary processes alter plant-environment interactions during development.
My research focuses on the diversification in the phenotypic plasticity of developmental timing. Because environments fluctuate daily and seasonally, the onsets of major life history events--e.g. germination, flowering, hibernation--are responses partly or wholly cued by environmental signals. These responses are often the products of adaptive evolution because as species expand their ranges, colonize new environments, or adjust to historical and recent anthropogenic changes, the combination of environmental cues predictive for the optimal timing of developmental transitions may change dramatically. In my lab, we seek to address three major questions: 1) how do organisms integrate environmental cues to trigger developmental transitions, 2) through what mechanisms does this plasticity evolve and 3) what natural or anthropogenic factors have driven or maintain this variation?
By connecting genetic variation to phenotypes to survival and reproduction, my lab's work aims to understand all levels of the evolutionary process, and consequently our studies range from molecular genetics to population and quantitative genomics to ecological studies in natural environments. We work predominantly in two systems, sunflowers and monkeyflowers, that exhibit tremendous variation across broad geographic transects in how flowering responds to photoperiod and other environmental cues. Characterizing the genetic architecture and ecological pressures involved in adaptation of these species to diverse environments will allow us to develop improved functional models that predict how species may adapt to future global change. In sunflower, my work also examines the genetics of how flowering time and other traits evolved during its domestication because we seek to understand the dynamics of how novel and complex trait syndromes evolve.
Ferris KG, Rushton T, Greenlee AB, Toll K, Blackman BK and Willis JH. Leaf shape evolution has a similar genetic architecture in three edaphic specialists within the Mimulus guttatus species complex. Annals of Botany 116: 213-223 (2015).
Friedman J, Twyford A, Willis JH, Blackman BK. The extent and genetic basis of phenotypic divergence in life history traits in Mimulus guttatus. Molecular Ecology 24: 111-122 (2015).
Kooyers NJ, Greenlee AB, Colicchio JM, Oh M, and Blackman BK. Replicate altitudinal clines reveal evolutionary flexibility underlies adaptation to drought stress in annual Mimulus guttatus. New Phytologist 206: 152-165 (2015).
Henry LP, Watson RHB, and Blackman BK. Transitions in photoperiodic flowering are common and involve few loci in wild sunflower (Helianthus; Asteraceae). American Journal of Botany 101: 1748-1758 (2014).
Vandenbrink JP, Brown EA, Harmer SL, and Blackman BK. Turning heads: the biology of solar tracking in sunflower. Plant Science 224: 20-26 (2014).
Miller CT, Glazer AM, Summer BR, Blackman BK, Norman AR, Shapiro MD, Cole BL, Peichel CL, Schluter D, and Kingsley DM. Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait loci. Genetics 197: 405-420 (2014).
Vosters SL, Jewell CP, Sherman NA, Einterz F, Blackman BK, and Moyle LC. The timing of molecular and morphological changes underlying reproductive transitions in wild tomatoes (Solanum sect. Lycopersicon). Molecular Ecology 23: 1965-1978 (2014).
Blackman BK. Interacting duplications, fluctuating selection, and convergence: the complex dynamics of flowering time evolution during sunflower domestication. Journal of Experimental Botany 62: 421-431 (2013).
Staton SE, Bakken BH, Blackman BK, Chapman MA, Kane NC, Tang S, Ungerer MC, Knapp SJ, Rieseberg LH, and Burke JM. The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements. Plant Journal 72: 142-153 (2012).
Flagel LE and Blackman BK. The first ten years of plant genomics and prospects for the next decade. In: J. Greilhuber, J. Wendel, IJ Leitch, and J Dolezel (eds). Plant Genome Diversity v.1, p. 1-15. Springer, Vienna. (2012).
Blackman BK, Scascitelli M, Kane NC, Luton HH, Rasmussen DA, Bye RA, Lentz DL, and Rieseberg LH. Sunflower domestication alleles support single domestication center in eastern North America. Proceedings of the National Academy of Sciences USA 108: 14350-14365 (2011).
Blackman BK, Michaels SD, and Rieseberg LH. Connecting the sun to flowering in sunflower adaptation. Molecular Ecology 20: 3503-3512 (2011).
Blackman BK, Rasmussen DA, Strasburg JL, Raduski AR, Burke JM, Knapp SJ, Michaels SD, and Rieseberg LH. Contributions of flowering time genes to sunflower domestication and improvement. Genetics, 187: 271-287 (2011).
Blackman BK, Strasburg JL, Raduski AR, Michaels SD, and Rieseberg LH. The role of recently derived FT paralogs in sunflower domestication. Current Biology 20: 629-635 (2010).
Blackman BK and Michaels SD. Does CONSTANS act as a transcription factor or as a co-activator? The answer may be – yes. New Phytologist 187: 1-3 (2010).
Rieseberg LH and Blackman BK. Speciation genes in plants. Annals of Botany 106: 439-55 (2010).
Blackman BK. Perspective: Connecting genetic variation to phenotypic clines. Molecular Ecology 19: 621-623 (2010). McKinnon JS, Mori S, Blackman BK, David L, Kingsley DM, Jamieson L,Chou J, and Schluter D. Evidence for ecology’s role in speciation. Nature 429: 294-298 (2004).
Colosimo PF, Peichel CL, Nereng K, Blackman BK, Shapiro MD, Schluter D, and Kingsley DM. The genetic architecture of parallel armor plate reduction in threespine stickleback. PLoS Biology 2(5): E109 (2004).
Shapiro MD, Marks ME, Peichel CL, Blackman BK, Nereng KS, Jonsson B, Schluter D, and Kingsley DM. Genetic and developmental basis of evolutionary pelvic reduction in threespine stickleback. Nature 428: 717-723 (2004).